PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1508s0005.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 268aa    MW: 29531.9 Da    PI: 8.4458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1508s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-18102151255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp   + + +r++lg++ tae Aa a+++a+++++g
  Kalax.1508s0005.1.p 102 HYRGVRQRP-WGKFAAEIRDP---N-KaARVWLGTYSTAEAAALAYDEAALRFKG 151
                          7********.**********9...3.35***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.4E-32101160IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-21102160IPR016177DNA-binding domain
CDDcd000182.84E-19102160No hitNo description
PROSITE profilePS5103223.696102159IPR001471AP2/ERF domain
PfamPF008475.3E-13102151IPR001471AP2/ERF domain
SMARTSM003801.5E-36102165IPR001471AP2/ERF domain
PRINTSPR003673.4E-10103114IPR001471AP2/ERF domain
PRINTSPR003673.4E-10125141IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MGKSNFVTWL CQGLKSLSRL DSRHGKRPFQ SDEEEKKEEM SGDEELFPMY STRSQQDMCV  60
MVSALSRVIG NSSDDSTSLA LPLPMPPPPD FATGSPSLLR RHYRGVRQRP WGKFAAEIRD  120
PNKAARVWLG TYSTAEAAAL AYDEAALRFK GSKAKLNFPE RVEYVHQMTP QLLSPSQPSS  180
LHPLQRNPHS YDVLGSNPDS NIRMKPSAAT TTQSWSPTTM SFSSVSSSSS SSSSLQEPNQ  240
PTCPSMSHYG GPGATSWSYN DNQPEYK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-27101162163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00495DAPTransfer from AT5G07310Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549660.17e-55PREDICTED: ethylene-responsive transcription factor ERF114-like, partial
SwissprotQ9FH542e-48EF114_ARATH; Ethylene-responsive transcription factor ERF114
TrEMBLV4K1F65e-48V4K1F6_EUTSA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.19e-38ERF family protein